ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3rr5A7 - ECOD Domain | ECOD

ECOD/Domains/e3rr5A7

e3rr5A7

UID: 001159094

PDB

Range: A:113-226
PDB: 3RR5 chain A(all domains)
UniProt: C0LJI8 (all domains)
Gene: lig

Molecule: DNA ligase (EC 6.5.1.6) (Polydeoxyribonucleotide synthase [ATP/NAD(+)])

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_N(4095.1.1.1)

Pfam Families

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

ECOD PDB View: 3RR5 RCSB PDB: 3RR5 PDBe: 3RR5 UniProt: C0LJI8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure