ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2r46B8 - ECOD Domain | ECOD

ECOD/Domains/e2r46B8

e2r46B8

UID: 001164837

PDB

Range: B:1-225,B:322-387
PDB: 2R46 chain B(all domains)
UniProt: P13035 (all domains)
Gene: glpD

Molecule: Aerobic glycerol-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in DAO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyDAO(2003.1.2.12)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
PhosphoenolpyruvatePEP
drugDrugBank DB01819

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2R46 RCSB PDB: 2R46 PDBe: 2R46 UniProt: P13035

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-(TRIS(HYDROXYMETHYL)METHYL)-3-AMINOPROPANESULFONIC ACID

+ 2 additives (octyl beta-D-glucopyranoside, 1,2-ETHANEDIOL)

octyl beta-D-glucopyranosideBOG
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.