ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2r46B9 - ECOD Domain | ECOD

ECOD/Domains/e2r46B9

e2r46B9

UID: 001164838

PDB

Range: B:388-495
PDB: 2R46 chain B(all domains)
UniProt: P13035 (all domains)
Gene: glpD

Molecule: Aerobic glycerol-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in DAO_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupC-terminal alpha domain in Alpha-Glycerophosphate Oxidase(6058)

HH-groupC-terminal alpha domain in Alpha-Glycerophosphate Oxidase(6058.1)

TT-groupC-terminal alpha domain in Alpha-Glycerophosphate Oxidase(6058.1.1)

FFamilyDAO_C(6058.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(TRIS(HYDROXYMETHYL)METHYL)-3-AMINOPROPANESULFONIC ACIDT3A

+ 2 additives (Imidazole, 1,2-ETHANEDIOL)

ImidazoleIMD
DrugBank DB03366
1,2-ETHANEDIOLEDO

Pfam Families

C-terminal domain of alpha-glycerophosphate oxidase

ClanCL0667Fer2_BFD

External Links

ECOD PDB View: 2R46 RCSB PDB: 2R46 PDBe: 2R46 UniProt: P13035

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.