ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ecqB12 - ECOD Domain | ECOD

ECOD/Domains/e3ecqB12

e3ecqB12

UID: 001166433

PDB

Range: B:1207-1405
PDB: 3ECQ chain B(all domains)
UniProt: Q8DR60 (all domains)
Gene: spr0328

Molecule: Endo-alpha-N-acetylgalactosaminidase

3D Structure

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Related Domains

Browse other domains in GalBD_like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyGalBD_like(10.32.1.53)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17974GalBD_like

Galactose-binding domain-like

ClanCL0220EF_hand

External Links

ECOD PDB View: 3ECQ RCSB PDB: 3ECQ PDBe: 3ECQ UniProt: Q8DR60

Downloads

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