ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bd4H2 - ECOD Domain | ECOD

ECOD/Domains/e4bd4H2

e4bd4H2

UID: 001168141

PDB

Range: H:1-48,H:52-93,H:97-110
PDB: 4BD4 chain H(all domains)
UniProt: P00441 (all domains)
Gene: SOD1

Molecule: SUPEROXIDE DISMUTASE [CU-ZN]

3D Structure

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Related Domains

Browse other domains in Sod_Cu →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCu,Zn superoxide dismutase-like(11.1.3)

FFamilySod_Cu(11.1.3.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Copper/zinc superoxide dismutase (SODC)

External Links

ECOD PDB View: 4BD4 RCSB PDB: 4BD4 PDBe: 4BD4 UniProt: P00441

Downloads

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