ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3t3fA5 - ECOD Domain | ECOD

ECOD/Domains/e3t3fA5

e3t3fA5

UID: 001168733

PDB

Range: A:293-422
PDB: 3T3F chain A(all domains)
UniProt: P19821 (all domains)
Gene: polA

Molecule: DNA polymerase I, thermostable

3D Structure

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Related Domains

Browse other domains in Taq-exonuc →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTaq-exonuc(2484.1.1.58)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL

Pfam Families

PF09281Taq-exonuc

Taq polymerase, exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 3T3F RCSB PDB: 3T3F PDBe: 3T3F UniProt: P19821

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.