ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1x7oA4 - ECOD Domain | ECOD

ECOD/Domains/e1x7oA4

e1x7oA4

UID: 001169343

PDB

Range: A:111-284
PDB: 1X7O chain A(all domains)
UniProt: Q9F5K6 (all domains)
Gene: aviRb

Molecule: 23S rRNA (uridine(2479)-2'-O)-methyltransferase (EC 2.1.1.208) (Avilamycin resistance protein B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

ECOD PDB View: 1X7O RCSB PDB: 1X7O PDBe: 1X7O UniProt: Q9F5K6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure