ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1qo0B2 - ECOD Domain | ECOD

ECOD/Domains/e1qo0B2

e1qo0B2

UID: 001173117

PDB

Range: B:122-257
PDB: 1QO0 chain B(all domains)
UniProt: P27017 (all domains)
Gene: amiC

Molecule: AMIC

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peripla_BP_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_5(2007.1.2.12)

Ligands

in contact, ≤ 4 Å

ButyramideBMD
drugDrugBank DB02121

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13433Peripla_BP_5

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 1QO0 RCSB PDB: 1QO0 PDBe: 1QO0 UniProt: P27017

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure