ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3bf0B5 - ECOD Domain | ECOD

ECOD/Domains/e3bf0B5

e3bf0B5

UID: 001174308

PDB

Range: B:56-71,B:93-320
PDB: 3BF0 chain B(all domains)
UniProt: P08395 (all domains)
Gene: sppA

Molecule: Protease 4 (EC 3.4.21.-) (Endopeptidase IV) (Protease IV) (Signal peptide peptidase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_S49 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyPeptidase_S49(2486.1.1.5)

Pfam Families

PF01343Peptidase_S49

Peptidase family S49

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 3BF0 RCSB PDB: 3BF0 PDBe: 3BF0 UniProt: P08395

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure