ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hdgA4 - ECOD Domain | ECOD

ECOD/Domains/e4hdgA4

e4hdgA4

UID: 001174690

PDB

Range: A:686-889
PDB: 4HDG chain A(all domains)
UniProt: P27395 (all domains)

Molecule: Polyprotein

3D Structure

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Related Domains

Browse other domains in Flavi_NS5_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyFlavi_NS5_thumb(4967.1.1.14)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20483Flavi_NS5_thumb

Flavivirus RNA-directed RNA polymerase, thumb domain

ClanCL0027RdRP

External Links

ECOD PDB View: 4HDG RCSB PDB: 4HDG PDBe: 4HDG UniProt: P27395

Downloads

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