ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qm9A3 - ECOD Domain | ECOD

ECOD/Domains/e1qm9A3

e1qm9A3

UID: 001178431

PDB

Range: A:1-110
PDB: 1QM9 chain A(all domains)
UniProt: P26599 (all domains)
Gene: PTBP1

Molecule: Polypyrimidine tract-binding protein 1 (PTB) (57 kDa RNA-binding protein PPTB-1) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_5(304.9.1.23)

Pfam Families

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

ClanCL0221RRM

External Links

ECOD PDB View: 1QM9 RCSB PDB: 1QM9 PDBe: 1QM9 UniProt: P26599

Downloads

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