ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jdbL2 - ECOD Domain | ECOD

ECOD/Domains/e1jdbL2

e1jdbL2

UID: 000117884

PDB

Range: L:2-152
PDB: 1JDB chain L(all domains)
UniProt: P0A6F1 (all domains)
Gene: carA

Molecule: CARBAMOYL PHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in CPSase_sm_chain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyCPSase_sm_chain(2487.1.1.5)

Ligands

in contact, ≤ 4 Å

L-GlutamineGLN
drugDrugBank DB00130
Chloride ionCL
Potassium ionK

Pfam Families

PF00988CPSase_sm_chain

Carbamoyl-phosphate synthase small chain, CPSase domain

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 1JDB RCSB PDB: 1JDB PDBe: 1JDB UniProt: P0A6F1

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.