ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bktI3 - ECOD Domain | ECOD

ECOD/Domains/e4bktI3

e4bktI3

UID: 001178952

PDB

Range: I:155-204
PDB: 4BKT chain I(all domains)
UniProt: P40337 (all domains)
Gene: VHL

Molecule: VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR

3D Structure

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Related Domains

Browse other domains in VHL_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSOCS box-like(4215)

HH-groupSOCS box-like(4215.1)

TT-groupSOCS box-like(4215.1.1)

FFamilyVHL_C(4215.1.1.2)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Glutamic acidGLU
drugDrugBank DB00142within 5 Å only

Shown in the structure viewer.

Pfam Families

VHL box domain

ClanCL0642SOCS_box

External Links

ECOD PDB View: 4BKT RCSB PDB: 4BKT PDBe: 4BKT UniProt: P40337

Downloads

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Drug annotations from DrugDomain.