ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2b2cB2 - ECOD Domain | ECOD

ECOD/Domains/e2b2cB2

e2b2cB2

UID: 001179668

PDB

Range: B:90-314
PDB: 2B2C chain B(all domains)
UniProt: G5EFG3 (all domains)
Gene: spds-1

Molecule: PABS domain-containing protein (Spermidine synthase (EC 2.5.1.16))

3D Structure

Loading viewer...

Related Domains

Browse other domains in Spermine_synth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilySpermine_synth(2003.1.5.13)

Pfam Families

PF01564Spermine_synth

Spermine/spermidine synthase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2B2C RCSB PDB: 2B2C PDBe: 2B2C UniProt: G5EFG3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure