ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3e4aB13 - ECOD Domain | ECOD

ECOD/Domains/e3e4aB13

e3e4aB13

UID: 001183180

PDB

Range: B:764-1011
PDB: 3E4A chain B(all domains)
UniProt: P14735 (all domains)
Gene: IDE

Molecule: Insulin-degrading enzyme

3D Structure

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Related Domains

Browse other domains in PqqF-like_C_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPqqF-like_C_4(309.1.1.11)

Ligands

in contact, ≤ 4 Å

N~2~-[(2R)-4-(HYDROXYAMINO)-2-(2-NAPHTHYLMETHYL)-4-OXOBUTANOYL]-L-ARGINYLGLYCYLGLYCINAMIDEQIX
Zinc ionZN
metalwithin 5 Å only

+ 2 additives (1,4-Dioxane, Acetic acid)

1,4-Dioxane

Pfam Families

PF22456PqqF-like_C_4

PQQ synthase PqqF-like, C-terminal lobe domain 4

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 3E4A RCSB PDB: 3E4A PDBe: 3E4A UniProt: P14735

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03316

Acetic acidACY

Shown in the structure viewer. Drug annotations from DrugDomain.