ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2jlcB7 - ECOD Domain | ECOD

ECOD/Domains/e2jlcB7

e2jlcB7

UID: 001185707

PDB

Range: B:1-207
PDB: 2JLC chain B(all domains)
UniProt: P17109 (all domains)
Gene: menD

Molecule: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TPP_enzyme_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_N(7574.1.1.7)

Pfam Families

PF02776TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2JLC RCSB PDB: 2JLC PDBe: 2JLC UniProt: P17109

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure