ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3klfI6 - ECOD Domain | ECOD

ECOD/Domains/e3klfI6

e3klfI6

UID: 001186617

PDB

Range: I:429-554
PDB: 3KLF chain I(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Reverse transcriptase/ribonuclease H

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNase_H →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_H(2484.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00075RNase_H

RNase H

ClanCL0219RNase_H

External Links

ECOD PDB View: 3KLF RCSB PDB: 3KLF PDBe: 3KLF UniProt: P03366

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure