ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i2pA8 - ECOD Domain | ECOD

ECOD/Domains/e4i2pA8

e4i2pA8

UID: 001186655

PDB

Range: A:-1-239
PDB: 4I2P chain A(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Gag-Pol polyprotein

3D Structure

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Related Domains

Browse other domains in RVT_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRVT_1(304.48.1.1)

Ligands

in contact, ≤ 4 Å

(2E)-3-[4-({6-[(4-methoxyphenyl)amino]-7H-purin-2-yl}amino)-3,5-dimethylphenyl]prop-2-enenitrileG73

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Reverse transcriptase (RNA-dependent DNA polymerase)

ClanCL0027RdRP

External Links

ECOD PDB View: 4I2P RCSB PDB: 4I2P PDBe: 4I2P UniProt: P03366

Downloads

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