ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4io1A4 - ECOD Domain | ECOD

ECOD/Domains/e4io1A4

e4io1A4

UID: 001190008

PDB

Range: A:7-136
PDB: 4IO1 chain A(all domains)
UniProt: Q5NFM5 (all domains)
Gene: rpiA

Molecule: Ribose-5-phosphate isomerase A

3D Structure

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Related Domains

Browse other domains in Rib_5-P_isom_A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyRib_5-P_isom_A(2003.1.7.10)

Ligands

in contact, ≤ 4 Å

Bromide ionBR
Chloride ionCL

+ 2 additives (Phosphate ion, Tetraethylene glycol)

Phosphate ionPO4

Pfam Families

PF06026Rib_5-P_isom_A

Ribose 5-phosphate isomerase A (phosphoriboisomerase A)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4IO1 RCSB PDB: 4IO1 PDBe: 4IO1 UniProt: Q5NFM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.