ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pb0B3 - ECOD Domain | ECOD

ECOD/Domains/e2pb0B3

e2pb0B3

UID: 001192801

PDB

Range: B:18-306
PDB: 2PB0 chain B(all domains)
UniProt: P40732 (all domains)
Gene: argD

Molecule: Acetylornithine/succinyldiaminopimelate aminotransferase

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2PB0 RCSB PDB: 2PB0 PDBe: 2PB0 UniProt: P40732

Downloads

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