ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ejiB3 - ECOD Domain | ECOD

ECOD/Domains/e1ejiB3

e1ejiB3

UID: 001194111

PDB

Range: B:7-321
PDB: 1EJI chain B(all domains)
UniProt: P50431 (all domains)
Gene: Shmt1

Molecule: SERINE HYDROXYMETHYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824
5-hydroxymethyl-5,6-dihydrofolic acidTHF
drugDrugBank DB02800

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1EJI RCSB PDB: 1EJI PDBe: 1EJI UniProt: P50431

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.