ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3l9qA1 - ECOD Domain | ECOD

ECOD/Domains/e3l9qA1

e3l9qA1

UID: 000119460

RepresentativePDB

Range: A:270-457
PDB: 3L9Q chain A(all domains)
UniProt: P49643 (all domains)
Gene: PRIM2

Molecule: DNA primase large subunit (DNA primase 58 kDa subunit) (p58)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_primase_lrg →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCryptochrome/photolyase FAD-binding domain-related(182)

HH-groupCryptochrome/photolyase FAD-binding domain-related(182.1)

TT-groupFe-S cluster domain of DNA primase(182.1.2)

FFamilyDNA_primase_lrg(182.1.2.1)

Pfam Families

PF04104DNA_primase_lrg

Eukaryotic and archaeal DNA primase, large subunit C-terminal domain

ClanCL0242DNA_primase_lrg

External Links

ECOD PDB View: 3L9Q RCSB PDB: 3L9Q PDBe: 3L9Q UniProt: P49643

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure