ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kdiB6 - ECOD Domain | ECOD

ECOD/Domains/e4kdiB6

e4kdiB6

UID: 001195915

PDB

Range: B:108-187
PDB: 4KDI chain B(all domains)
UniProt: P55072 (all domains)
Gene: VCP

Molecule: Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP)

3D Structure

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Related Domains

Browse other domains in CDC48_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyCDC48_2(229.1.1.1)

Pfam Families

PF02933CDC48_2

Cell division protein 48 (CDC48), domain 2

ClanCL0402Cdc48_2-like

External Links

ECOD PDB View: 4KDI RCSB PDB: 4KDI PDBe: 4KDI UniProt: P55072

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