ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ik9A12 - ECOD Domain | ECOD

ECOD/Domains/e4ik9A12

e4ik9A12

UID: 001198793

PDB

Range: A:382-448
PDB: 4IK9 chain A(all domains)
UniProt: K4DIE3 (all domains)

Molecule: RCaMP, Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in EF-hand_1, EF-hand_6, EF-hand_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_1, EF-hand_6, EF-hand_7(108.1.1.96)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00036EF-hand_1

EF hand domain

ClanCL0220EF_hand

PF13405EF-hand_6

EF-hand domain

ClanCL0220EF_hand

PF13499EF-hand_7

EF-hand domain pair

ClanCL0220EF_hand

External Links

ECOD PDB View: 4IK9 RCSB PDB: 4IK9 PDBe: 4IK9 UniProt: K4DIE3

Downloads

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