ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vs0B6 - ECOD Domain | ECOD

ECOD/Domains/e1vs0B6

e1vs0B6

UID: 001199513

PDB

Range: B:640-759
PDB: 1VS0 chain B(all domains)
UniProt: P9WNV3 (all domains)
Gene: ligD

Molecule: Putative DNA ligase-like protein Rv0938/MT0965

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_A_C(2.1.1.31)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04679DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

ClanCL0021OB

External Links

ECOD PDB View: 1VS0 RCSB PDB: 1VS0 PDBe: 1VS0 UniProt: P9WNV3

Downloads

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