ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gd9C2 - ECOD Domain | ECOD

ECOD/Domains/e4gd9C2

e4gd9C2

UID: 001202563

PDB

Range: C:49-248
PDB: 4GD9 chain C(all domains)
UniProt: P22629 (all domains)

Molecule: Streptavidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

BiotinBTN
drugDrugBank DB00121

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Avidin family

External Links

ECOD PDB View: 4GD9 RCSB PDB: 4GD9 PDBe: 4GD9 UniProt: P22629

Downloads

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Drug annotations from DrugDomain.