ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y27B5 - ECOD Domain | ECOD

ECOD/Domains/e2y27B5

e2y27B5

UID: 001203409

PDB

Range: B:325-430
PDB: 2Y27 chain B(all domains)
UniProt: B4E7B5 (all domains)
Gene: paaK

Molecule: PHENYLACETATE-COENZYME A LIGASE

3D Structure

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Related Domains

Browse other domains in AMP-binding_C_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C_2(327.5.1.3)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
MercaptoethanolBME
drugDrugBank DB03345
Magnesium ion

Pfam Families

PF14535AMP-binding_C_2

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 2Y27 RCSB PDB: 2Y27 PDBe: 2Y27 UniProt: B4E7B5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Thiocyanate ionSCN

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.