ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j3dA3 - ECOD Domain | ECOD

ECOD/Domains/e4j3dA3

e4j3dA3

UID: 001207834

PDB

Range: A:1-297
PDB: 4J3D chain A(all domains)
UniProt: P47205 (all domains)
Gene: lpxC

Molecule: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

3D Structure

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Related Domains

Browse other domains in LpxC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyLpxC(212.1.1.15)

Ligands

in contact, ≤ 4 Å

N~1~-hydroxy-N~5~-(3-hydroxypropyl)-N~2~-[4-(phenylethynyl)benzoyl]-L-glutamamide1JS
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UDP-3-O-acyl N-acetylglycosamine deacetylase

ClanCL0329S5

External Links

ECOD PDB View: 4J3D RCSB PDB: 4J3D PDBe: 4J3D UniProt: P47205

Downloads

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