ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vxxA2 - ECOD Domain | ECOD

ECOD/Domains/e3vxxA2

e3vxxA2

UID: 001210064

PDB

Range: A:72-134
PDB: 3VXX chain A(all domains)
UniProt: Q9Z2D7 (all domains)
Gene: Mbd4

Molecule: Methyl-CpG-binding domain protein 4 (EC 3.2.2.-) (Methyl-CpG-binding protein MBD4) (Mismatch-specific DNA N-glycosylase)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupMethyl-CpG-binding domain, MBD(252.1)

TT-groupMethyl-CpG-binding domain, MBD(252.1.1)

FFamilyMBD(252.1.1.1)

Pfam Families

Methyl-CpG binding domain

ClanCL0081MBD-like

External Links

ECOD PDB View: 3VXX RCSB PDB: 3VXX PDBe: 3VXX UniProt: Q9Z2D7

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