ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hrdD3 - ECOD Domain | ECOD

ECOD/Domains/e3hrdD3

e3hrdD3

UID: 001210266

PDB

Range: D:1-81
PDB: 3HRD chain D(all domains)
UniProt: Q0QLF3 (all domains)
Gene: ndhS

Molecule: Nicotinate dehydrogenase small FeS subunit

3D Structure

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Related Domains

Browse other domains in Fer2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFer2(221.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
FE2/S2 (INORGANIC) CLUSTERFES

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

2Fe-2S iron-sulfur cluster binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 3HRD RCSB PDB: 3HRD PDBe: 3HRD UniProt: Q0QLF3

Downloads

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