ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ivdB4 - ECOD Domain | ECOD

ECOD/Domains/e3ivdB4

e3ivdB4

UID: 001211214

PDB

Range: B:327-519
PDB: 3IVD chain B(all domains)
UniProt: Q8FBB1 (all domains)

Molecule: Nucleotidase

3D Structure

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Related Domains

Browse other domains in 5_nucleotid_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805)

HH-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1)

TT-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1.1)

FFamily5_nucleotid_C(805.1.1.1)

Ligands

in contact, ≤ 4 Å

UridineURI
drugDrugBank DB02745
MANGANESE (II) IONMN
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF028725_nucleotid_C

5'-nucleotidase, C-terminal domain

ClanCL0781NadN_C

External Links

ECOD PDB View: 3IVD RCSB PDB: 3IVD PDBe: 3IVD UniProt: Q8FBB1

Downloads

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