ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1a6cA3 - ECOD Domain | ECOD

ECOD/Domains/e1a6cA3

e1a6cA3

UID: 000001216

RepresentativePDB

Range: A:349-513
PDB: 1A6C chain A(all domains)
UniProt: Q88894 (all domains)

Molecule: Capsid protein (Coat protein)

3D Structure

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Related Domains

Browse other domains in Nepo_coat_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyNepo_coat_C(10.2.1.37)

Pfam Families

PF03688Nepo_coat_C

Nepovirus coat protein, C-terminal domain

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1A6C RCSB PDB: 1A6C PDBe: 1A6C UniProt: Q88894

Downloads

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