ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fucA2 - ECOD Domain | ECOD

ECOD/Domains/e4fucA2

e4fucA2

UID: 001216930

PDB

Range: A:1-246
PDB: 4FUC chain A(all domains)
UniProt: P00749 (all domains)
Gene: PLAU

Molecule: Urokinase-type plasminogen activator

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

6-[N-(4-(Aminomethyl)Phenyl)Carbamyl]-2-Naphthalenecarboxamidine239
drugDrugBank DB02398
Succinic acidSIN
drugDrugBank DB00139

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4FUC RCSB PDB: 4FUC PDBe: 4FUC UniProt: P00749

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.