ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fipE6 - ECOD Domain | ECOD

ECOD/Domains/e4fipE6

e4fipE6

UID: 001218177

PDB

Range: E:1-133
PDB: 4FIP chain E(all domains)
UniProt: P50102 (all domains)
Gene: UBP8

Molecule: Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.4.19.12) (Deubiquitinating enzyme 8) (SAGA complex subunit UBP8) (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 4FIP RCSB PDB: 4FIP PDBe: 4FIP UniProt: P50102

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