ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3seqD5 - ECOD Domain | ECOD

ECOD/Domains/e3seqD5

e3seqD5

UID: 001225229

PDB

Range: D:339-679
PDB: 3SEQ chain D(all domains)
UniProt: P9WJJ3 (all domains)
Gene: nadE

Molecule: Glutamine-dependent NAD(+) synthetase

3D Structure

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Related Domains

Browse other domains in NAD_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyNAD_synthase(2005.1.1.18)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Deamido-Nad+DND
drugDrugBank DB04099within 5 Å only

Pfam Families

PF02540NAD_synthase

NAD synthase

ClanCL0039HUP

External Links

ECOD PDB View: 3SEQ RCSB PDB: 3SEQ PDBe: 3SEQ UniProt: P9WJJ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.