ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2vfjD2 - ECOD Domain | ECOD

ECOD/Domains/e2vfjD2

e2vfjD2

UID: 001228379

PDB

Range: D:5-361
PDB: 2VFJ chain D(all domains)
UniProt: P21580 (all domains)
Gene: TNFAIP3

Molecule: TUMOR NECROSIS FACTOR

3D Structure

Loading viewer...

Related Domains

Browse other domains in OTU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyOTU(219.1.1.15)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

OTU-like cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2VFJ RCSB PDB: 2VFJ PDBe: 2VFJ UniProt: P21580

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure