ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4aw0A2 - ECOD Domain | ECOD

ECOD/Domains/e4aw0A2

e4aw0A2

UID: 001229603

PDB

Range: A:75-359
PDB: 4AW0 chain A(all domains)
UniProt: O15530 (all domains)
Gene: PDPK1

Molecule: 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
(4R,5R)-1,2-dithiane-4,5-diolDTD
drugDrugBank DB01822
Magnesium ion

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 4AW0 RCSB PDB: 4AW0 PDBe: 4AW0 UniProt: O15530

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

[(1R)-3-(4-chlorophenyl)-3-oxo-1-phenylpropyl]propanedioic acidMJF

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.