ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4immB5 - ECOD Domain | ECOD

ECOD/Domains/e4immB5

e4immB5

UID: 001238059

RepresentativePDB

Range: B:44-392
PDB: 4IMM chain B(all domains)
UniProt: D5VCM9 (all domains)

Molecule: Outer membrane assembly lipoprotein YfgL

3D Structure

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Related Domains

Browse other domains in PQQ_2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyPQQ_2(5.1.5.11)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Outer membrane protein assembly factor BamB

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4IMM RCSB PDB: 4IMM PDBe: 4IMM UniProt: D5VCM9

Downloads

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