ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3uljB2 - ECOD Domain | ECOD

ECOD/Domains/e3uljB2

e3uljB2

UID: 001245216

PDB

Range: B:25-114
PDB: 3ULJ chain B(all domains)
UniProt: B4F6I0 (all domains)
Gene: lin28b

Molecule: Lin28b, DNA-binding protein

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyCSD(2.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

'Cold-shock' DNA-binding domain

ClanCL0021OB

External Links

ECOD PDB View: 3ULJ RCSB PDB: 3ULJ PDBe: 3ULJ UniProt: B4F6I0

Downloads

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