ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j1nG4 - ECOD Domain | ECOD

ECOD/Domains/e3j1nG4

e3j1nG4

UID: 001245351

PDB

Range: G:1-68
PDB: 3J1N chain G(all domains)
UniProt: P34087 (all domains)
Gene: RPB7

Molecule: DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II subunit B7) (B16)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SHS2_Rpb7-N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupFlavin-binding protein dodecin-like(872.1)

TT-groupFlavin-binding protein dodecin-like(872.1.1)

FFamilySHS2_Rpb7-N(872.1.1.1)

Pfam Families

PF03876SHS2_Rpb7-N

SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397

ClanCL0319SHS2

External Links

ECOD PDB View: 3J1N RCSB PDB: 3J1N PDBe: 3J1N UniProt: P34087

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure