ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3umkA3 - ECOD Domain | ECOD

ECOD/Domains/e3umkA3

e3umkA3

UID: 001248625

PDB

Range: A:309-492
PDB: 3UMK chain A(all domains)
UniProt: P05067 (all domains)
Gene: APP

Molecule: Amyloid beta A4 protein

3D Structure

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Related Domains

Browse other domains in APP_E2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSTAT-like(603)

HH-groupCAPPD, an extracellular domain of amyloid beta A4 protein(603.3)

TT-groupCAPPD, an extracellular domain of amyloid beta A4 protein(603.3.1)

FFamilyAPP_E2(603.3.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
COPPER (II) IONCU
metal

+ 1 additive (Acetate)

Acetate

Pfam Families

E2 domain of amyloid precursor protein

External Links

ECOD PDB View: 3UMK RCSB PDB: 3UMK PDBe: 3UMK UniProt: P05067

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.