ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3nyjA3 - ECOD Domain | ECOD

ECOD/Domains/e3nyjA3

e3nyjA3

UID: 001248641

PDB

Range: A:360-540
PDB: 3NYJ chain A(all domains)
UniProt: P05067 (all domains)
Gene: APP

Molecule: Amyloid beta A4 protein

3D Structure

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Related Domains

Browse other domains in APP_E2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSTAT-like(603)

HH-groupCAPPD, an extracellular domain of amyloid beta A4 protein(603.3)

TT-groupCAPPD, an extracellular domain of amyloid beta A4 protein(603.3.1)

FFamilyAPP_E2(603.3.1.1)

Ligands

in contact, ≤ 4 Å

Osmium ionOS
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

E2 domain of amyloid precursor protein

External Links

ECOD PDB View: 3NYJ RCSB PDB: 3NYJ PDBe: 3NYJ UniProt: P05067

Downloads

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