ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dl0C2 - ECOD Domain | ECOD

ECOD/Domains/e4dl0C2

e4dl0C2

UID: 001250588

PDB

Range: C:158-273
PDB: 4DL0 chain C(all domains)
UniProt: P31412 (all domains)
Gene: VMA5

Molecule: V-type proton ATPase subunit C

3D Structure

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Related Domains

Browse other domains in V-ATPase_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupferredoxin-like domain in vacuolar ATP synthase subunit C(304.126)

TT-groupferredoxin-like domain in vacuolar ATP synthase subunit C(304.126.1)

FFamilyV-ATPase_C(304.126.1.2)

Ligands

in contact, ≤ 4 Å

Trimethyl lead ionPBM

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03223V-ATPase_C

V-ATPase subunit C

External Links

ECOD PDB View: 4DL0 RCSB PDB: 4DL0 PDBe: 4DL0 UniProt: P31412

Downloads

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