ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nirB3 - ECOD Domain | ECOD

ECOD/Domains/e1nirB3

e1nirB3

UID: 001251545

PDB

Range: B:117-543
PDB: 1NIR chain B(all domains)
UniProt: P24474 (all domains)
Gene: nirS

Molecule: NITRITE REDUCTASE

3D Structure

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Related Domains

Browse other domains in Cytochrom_D1 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyCytochrom_D1(5.1.5.9)

Ligands

in contact, ≤ 4 Å

Heme DDHE
drugDrugBank DB03469
Hydroxide ionOH
drugDrugBank DB14522
Chloride ion

Pfam Families

PF02239Cytochrom_D1

Cytochrome D1 heme domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 1NIR RCSB PDB: 1NIR PDBe: 1NIR UniProt: P24474

Downloads

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+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.