ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qjpA4 - ECOD Domain | ECOD

ECOD/Domains/e3qjpA4

e3qjpA4

UID: 001252144

PDB

Range: A:119-239
PDB: 3QJP chain A(all domains)
UniProt: O58088 (all domains)
Gene: cas6nc

Molecule: Putative CRISPR-associated endoribonuclease-like protein Cas6nc (PhCas6nc)

3D Structure

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Related Domains

Browse other domains in Cas_Cas6_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas_Cas6_C(304.51.1.1)

Pfam Families

PF01881Cas_Cas6_C

CRISPR associated protein Cas6, C-terminal

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 3QJP RCSB PDB: 3QJP PDBe: 3QJP UniProt: O58088

Downloads

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