ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lkbB3 - ECOD Domain | ECOD

ECOD/Domains/e3lkbB3

e3lkbB3

UID: 001253211

PDB

Range: B:125-254
PDB: 3LKB chain B(all domains)
UniProt: Q5SL42 (all domains)
Gene: TTHA0451

Molecule: Probable branched-chain amino acid ABC transporter, amino acid binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_6(2007.1.2.13)

Ligands

in contact, ≤ 4 Å

ValineVAL
drugDrugBank DB00161

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer.

Pfam Families

PF13458Peripla_BP_6

Periplasmic binding protein

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3LKB RCSB PDB: 3LKB PDBe: 3LKB UniProt: Q5SL42

Downloads

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Drug annotations from DrugDomain.