ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ojoB4 - ECOD Domain | ECOD

ECOD/Domains/e3ojoB4

e3ojoB4

UID: 001260706

PDB

Range: B:2-193
PDB: 3OJO chain B(all domains)
UniProt: P95708 (all domains)
Gene: cap5O

Molecule: Cap5O

3D Structure

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Related Domains

Browse other domains in UDPG_MGDP_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyUDPG_MGDP_dh_N(2003.1.1.45)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Dipicolinic acidPDC
drugDrugBank DB04267

Shown in the structure viewer.

Pfam Families

PF03721UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3OJO RCSB PDB: 3OJO PDBe: 3OJO UniProt: P95708

Downloads

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Drug annotations from DrugDomain.