ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ojoA5 - ECOD Domain | ECOD

ECOD/Domains/e3ojoA5

e3ojoA5

UID: 001260710

PDB

Range: A:194-298
PDB: 3OJO chain A(all domains)
UniProt: P95708 (all domains)
Gene: cap5O

Molecule: Cap5O

3D Structure

Loading viewer...

Related Domains

Browse other domains in UDPG_MGDP_dh →

Classification

AArchitecturealpha arrays(a.6)

XX-group6-phosphogluconate dehydrogenase C-terminal domain-like(129)

HH-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1)

TT-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1.1)

FFamilyUDPG_MGDP_dh(129.1.1.3)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Dipicolinic acidPDC
drugDrugBank DB04267
Europium ion

Pfam Families

PF00984UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

ClanCL01066PGD_C

External Links

ECOD PDB View: 3OJO RCSB PDB: 3OJO PDBe: 3OJO UniProt: P95708

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.