ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3uu9B3 - ECOD Domain | ECOD

ECOD/Domains/e3uu9B3

e3uu9B3

UID: 001277933

PDB

Range: B:5-524
PDB: 3UU9 chain B(all domains)
UniProt: Q5F2I3 (all domains)

Molecule: Eight-heme nitrite reductase

3D Structure

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Related Domains

Browse other domains in Cytochrom_C552 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupDi-heme elbow motif(139.2)

TT-groupDi-heme elbow motif(139.2.1)

FFamilyCytochrom_C552(139.2.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Calcium ionCA
metal
Sodium ionNA

Pfam Families

PF02335Cytochrom_C552

Cytochrome c552

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 3UU9 RCSB PDB: 3UU9 PDBe: 3UU9 UniProt: Q5F2I3

Downloads

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metal

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.