ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2o1sB4 - ECOD Domain | ECOD

ECOD/Domains/e2o1sB4

e2o1sB4

UID: 001278245

PDB

Range: B:319-490
PDB: 2O1S chain B(all domains)
UniProt: P77488 (all domains)
Gene: dxs

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Thiamine diphosphateTPP
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2O1S RCSB PDB: 2O1S PDBe: 2O1S UniProt: P77488

Downloads

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